{"id":470119,"date":"2010-03-25T03:10:00","date_gmt":"2010-03-25T07:10:00","guid":{"rendered":"tag:blogger.com,1999:blog-1752027331714385066.post-3634585620874974515"},"modified":"2010-03-25T03:10:38","modified_gmt":"2010-03-25T07:10:38","slug":"chicken-domestication-revelation","status":"publish","type":"post","link":"https:\/\/mereja.media\/index\/470119","title":{"rendered":"Chicken Domestication Revelation"},"content":{"rendered":"<div class=\"MsoNormal\" style=\"text-align: justify;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\"><br \/><\/span><\/div>\n<div class=\"separator\" style=\"clear: both; text-align: center;\"><a href=\"http:\/\/3.bp.blogspot.com\/_Jx78YcF-F8U\/S6sMYqsTSfI\/AAAAAAAABVU\/aF8-0EMg3Wo\/s1600\/images.jpg\" imageanchor=\"1\" style=\"margin-left: 1em; margin-right: 1em;\"><img loading=\"lazy\" decoding=\"async\" border=\"0\" height=\"384\" src=\"http:\/\/3.bp.blogspot.com\/_Jx78YcF-F8U\/S6sMYqsTSfI\/AAAAAAAABVU\/aF8-0EMg3Wo\/s400\/images.jpg\" width=\"400\" \/><\/a><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\"><br \/><\/span><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\"><br \/><\/span><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\">What is fascinating here is that the two key genes associated with two streams of chicken specialization have been outright isolated and their universality established in present populations.<o:p><\/o:p><\/span><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\">It is revealing in that the driving mechanisms of species alteration through domestication is much clearer and progress can be how made with far less controversy.<o:p><\/o:p><\/span><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\">Domestication is a powerful process that appears to release a wide range of characteristics never seen in the wild, allowing the derivative breeding we are accustomed to.<o:p><\/o:p><\/span><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\"><span style=\"mso-spacerun: yes;\">&nbsp;<\/span>This works assists us in understanding the process much better.<o:p><\/o:p><\/span><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><b><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-font-kerning: 0pt;\">Scientific Breakthrough In Genetic Studies Of Animal Domestication<\/span><\/i><\/b><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">by Staff Writers<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><st1:place w:st=\"on\"><st1:city w:st=\"on\">Uppsala<\/st1:city>, <st1:country-region w:st=\"on\">Sweden<\/st1:country-region><\/st1:place> (SPX) Mar 17, 2010<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: windowtext; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">A selective sweep takes place when a favorable mutation becomes fixed in a population. This happens in all species during the course of evolution and it happens in domestic animals as a consequence of human-driven selection for favored traits. One of the most interesting findings in this study was a striking selective sweep at the TSHR gene that codes for the thyroid-stimulating hormone receptor.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"letter-spacing: 0pt;\"><a href=\"http:\/\/www.seeddaily.com\/reports\/Scientific_Breakthrough_In_Genetic_Studies_Of_Animal_Domestication_999.html\">http:\/\/www.seeddaily.com\/reports\/Scientific_Breakthrough_In_Genetic_Studies_Of_Animal_Domestication_999.html<\/a><\/span><\/i><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: windowtext; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/>The domestication of&nbsp;animals and plants is the most important technological innovation during human history. This genetic transformation of wild species has occurred as humans have used individuals carrying favorable gene variants for breeding purposes. In the current issue of Nature an international team led by researchers at <st1:place w:st=\"on\"><st1:placename w:st=\"on\">Uppsala<\/st1:placename> <st1:placetype w:st=\"on\">University<\/st1:placetype><\/st1:place> has revealed some of the secrets underlying the remarkable development of the domestic chicken.<\/span><\/i><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: windowtext; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">The domestic chicken has in recent years become the most important and cost-effective source of animal protein world-wide. In the beginning of the 20th century specialized layer (egg-producing) and broiler (meat-producing) chickens were developed. The approach has been remarkably successful and has led to huge improvements in productivity.<\/span><\/i><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: windowtext; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">&#8220;The strategy to study four different populations of layer chickens as well as four broiler populations allowed us to reveal genetic changes of crucial importance for chicken domestication in general as well as changes that were essential for the development of layers or broilers&#8221;, says Leif Andersson who coordinated the study.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">In 2004, a draft&nbsp;genome sequence&nbsp;of the chicken was established by sequencing a single female red junglefowl, the wild ancestor of chickens. The task required a major economic investment (millions of US dollars) and a large international team of scientists. In the current study the researchers have used new sequencing technologies and a modest budget to analyze pools of individuals representing eight different populations of the domestic chicken and a red junglefowl population.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">&#8220;This is the first study ever where the genetic diversity within and between populations are examined across the whole genome&#8221;, says Michael Zody, who did his PhD partially on this project and is now a researcher at the Broad Institute. &#8220;The new sequencing technologies allow us to address important biological questions that were impossible to study just a few years ago&#8221;.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">A selective sweep takes place when a favorable mutation becomes fixed in a population. This happens in all species during the course of evolution and it happens in domestic animals as a consequence of human-driven selection for favored traits. One of the most interesting findings in this study was a striking selective sweep at the TSHR&nbsp;gene&nbsp;that codes for the thyroid-stimulating hormone receptor.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">In vertebrates, this protein has a key role in metabolic regulation but also in determining the timing of reproduction as a response to changes in day length, a trait that is strictly controlled in most wild animals but which is drastically altered in domestic chickens that can reproduce all year around.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">&#8220;Our discovery that every domestic chicken that we have studied representing populations from Sweden to China carry a mutant form of the TSHR protein strongly suggests that this genetic change was an important step in the&nbsp;evolution&nbsp;of the domestic chicken&#8221;, says Leif Andersson.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">Another very convincing selective sweep was observed in broiler chickens and involved the TBC1D1 gene, a gene that has previously been associated with obesity in humans and the TBC1D1 protein is involved in the regulation of glucose uptake in muscle cells.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">&#8220;Our study shows that billions of broiler chickens worldwide carry a mutant form of the TBC1D1 gene and we are now very eager to identify the causative mutation at this locus and to reveal the molecular mechanism by which it impacts growth&#8221;, says Carl-Johan Rubin who was responsible for the bioinformatic analysis of selective sweeps.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">The study is a breakthrough as regards&nbsp;genetic studies&nbsp;of domestic animals.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\"><br \/><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"mso-margin-bottom-alt: auto; mso-margin-top-alt: auto; text-align: justify;\"><i style=\"mso-bidi-font-style: normal;\"><span style=\"color: black; letter-spacing: 0pt; mso-bidi-font-weight: normal; mso-font-kerning: 0pt;\">&#8220;Our study has direct implications for animal breeding and enhances the importance of the domestic chicken as a model organism for biomedical research since we can so effectively reveal genes associated with changes in phenotypic traits&#8221;, concludes Leif Andersson.<o:p><\/o:p><\/span><\/i><\/div>\n<div class=\"MsoNormal\" style=\"text-align: justify;\"><\/div>\n<div class=\"blogger-post-footer\"><img width='1' height='1' src='https:\/\/blogger.googleusercontent.com\/tracker\/1752027331714385066-3634585620874974515?l=globalwarming-arclein.blogspot.com' alt='' \/><\/div>\n","protected":false},"excerpt":{"rendered":"<p>What is fascinating here is that the two key genes associated with two streams of chicken specialization have been outright isolated and their universality established in present populations. It is revealing in that the driving mechanisms of species alteration through domestication is much clearer and progress can be how made with far less controversy. Domestication [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[7],"tags":[],"class_list":["post-470119","post","type-post","status-publish","format-standard","hentry","category-news"],"_links":{"self":[{"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/posts\/470119","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/comments?post=470119"}],"version-history":[{"count":0,"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/posts\/470119\/revisions"}],"wp:attachment":[{"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/media?parent=470119"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/categories?post=470119"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/mereja.media\/index\/wp-json\/wp\/v2\/tags?post=470119"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}